Biomasse, Environnement, Adaptation et Métabolisme

Vermachova M, Purkrtova Z, Santrucek J, Jolivet P, Chardot T, Kodicek M (2014). Combining chymotrypsin/trypsin digestion to identify hydrophobic proteins from oil bodies. Methods Mol Biol, 1072:185-198. PubMed | DOI

Amiour N, Imbaud S, Clément G, Agier N, Zivy M, Valot B, Balliau T, Quilleré I, Terce-Laforgue T, Dargel-Graffin C, Hirel B (2014). An integrated "omics" approach to the characterization of maize (Zea mays L.) mutants deficient in the expression of two genes encoding cytosolic glutamine synthetase. BMC Genomics, 15:1005. PubMed | DOI

Simons M, Saha R, Amiour N, Kumar A, Guillard L, Clément G, Miquel M, Li Z, Mouille G, Lea PJ, Hirel B, Maranas CD (2014). Assessing the metabolic impact of nitrogen availability using a compartmentalized maize leaf genome-scale model. Plant Physiol, 166:1659-1674. PubMed | DOI

Simons M, Saha R, Guillard L, Clément G, Armengaud P, Canas R, Maranas CD, Lea PJ, Hirel B (2014). Nitrogen-use efficiency in maize (Zea mays L.): from 'omics' studies to metabolic modelling. J Exp Bot, 65:5657-5671. PubMed | DOI

Chardon F, Jasinski S, Durandet M, Lécureuil A, Soulay F, Bedu M, Guerche P, Masclaux-Daubresse C (2014). QTL meta-analysis in Arabidopsis reveals an interaction between leaf senescence and resource allocation to seeds. J Exp Bot, 65:3949-3962. PubMed | DOI

Aznar A, Chen NW, Rigault M, Riache N, Joseph D, Desmaele D, Mouille G, Boutet S, Soubigou-Taconnat L, Renou JP, Thomine S, Expert D, Dellagi A (2014). Scavenging iron: a novel mechanism of plant immunity activation by microbial siderophores. Plant Physiol, 164:2167-2183. PubMed | DOI

Fagard M, Launay A, Clément G, Courtial J, Dellagi A, Farjad M, Krapp A, Soulie MC, Masclaux-Daubresse C (2014). Nitrogen metabolism meets phytopathology. J Exp Bot, 65:5643-5656. PubMed | DOI

Le Roux C, Del Prete S, Boutet-Mercey S, Perreau F, Balague C, Roby D, Fagard M, Gaudin V (2014). The hnRNP-Q protein LIF2 participates in the plant immune response. PLoS One, 9:e99343. PubMed | DOI

Chardin C, Girin T, Roudier F, Meyer C, Krapp A (2014). The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development. J Exp Bot, 65:5577-5587. PubMed | DOI

David LC, Dechorgnat J, Berquin P, Routaboul JM, Debeaujon I, Daniel-Vedele F, Ferrario-Méry S (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. J Exp Bot, 65:885-893. PubMed | DOI

Girin T, David LC, Chardin C, Sibout R, Krapp A, Ferrario-Méry S, Daniel-Vedele F (2014). Brachypodium: a promising hub between model species and cereals. J Exp Bot, 65:5683-5696. PubMed | DOI

Klemens P, Patzke K, Krapp A, Chardon F, Neuhaus E (2014). SWEET16 and SWEET17, two novel vacuolar sugar carriers with impact on cellular sugar homeostasis and plant traits. Biochemistry and cell biology, 92:589-589. PubMed | DOI

Krapp A, David LC, Chardin C, Girin T, Marmagne A, Leprince AS, Chaillou S, Ferrario-Méry S, Meyer C, Daniel-Vedele F (2014). Nitrate transport and signalling in Arabidopsis. J Exp Bot, 65:789-798. PubMed | DOI

Leprince AS, Magalhaes N, De Vos D, Bordenave M, Crilat E, Clément G, Meyer C, Munnik T, Savoure A (2014). Involvement of Phosphatidylinositol 3-kinase in the regulation of proline catabolism in Arabidopsis thaliana. Front Plant Sci, 5:772. PubMed | DOI

Leran S, Varala K, Boyer JC, Chiurazzi M, Crawford N, Daniel-Vedele F, David L, Dickstein R, Fernandez E, Forde B, Gassmann W, Geiger D, Gojon A, Gong JM, Halkier BA, Harris JM, Hedrich R, Limami AM, Rentsch D, Seo M, Tsay YF, Zhang M, Coruzzi G, Lacombe B (2014). A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants. Trends Plant Sci, 19:5-9. PubMed | DOI

Lezhneva L, Kiba T, Feria-Bourrellier AB, Lafouge F, Boutet-Mercey S, Zoufan P, Sakakibara H, Daniel-Vedele F, Krapp A (2014). The Arabidopsis nitrate transporter NRT2.5 plays a role in nitrate acquisition and remobilization in nitrogen-starved plants. Plant J, 80:230-241. PubMed | DOI

Bellini C, Pacurar DI, Perrone I (2014). Adventitious roots and lateral roots: similarities and differences. Annu Rev Plant Biol, 65:639-666. PubMed | DOI

Mauriat M, Petterle A, Bellini C, Moritz T (2014). Gibberellins inhibit adventitious rooting in hybrid aspen and Arabidopsis by affecting auxin transport. Plant J, 78:372-384. PubMed | DOI

Pacurar DI, Pacurar ML, Bussell JD, Schwambach J, Pop TI, Kowalczyk M, Gutierrez L, Cavel E, Chaabouni S, Ljung K, Fett-Neto AG, Pamfil D, Bellini C (2014). Identification of new adventitious rooting mutants amongst suppressors of the Arabidopsis thaliana superroot2 mutation. J Exp Bot, 65:1605-1618. PubMed | DOI

Pacurar DI, Pacurar ML, Pacurar AM, Gutierrez L, Bellini C (2014). A novel viable allele of Arabidopsis CULLIN1 identified in a screen for superroot2 suppressors by next generation sequencing-assisted mapping. PLoS One, 9:e100846. PubMed | DOI

Pacurar DI, Perrone I, Bellini C (2014). Auxin is a central player in the hormone cross-talks that control adventitious rooting. Physiol Plant, 151:83-96. PubMed | DOI

Galland M, Boutet-Mercey S, Lounifi I, Godin B, Balzergue S, Grandjean O, Morin H, Perreau F, Debeaujon I, Rajjou L (2014). Compartmentation and dynamics of flavone metabolism in dry and germinated rice seeds. Plant Cell Physiol, 55:1646-1659. PubMed | DOI

Galland M, Huguet R, Arc E, Cueff G, Job D, Rajjou L (2014). Dynamic proteomics emphasizes the importance of selective mRNA translation and protein turnover during Arabidopsis seed germination. Mol Cell Proteomics, 13:252-268. PubMed | DOI

Jallet D, Thurotte A, Leverenz RL, Perreau F, Kerfeld CA, Kirilovsky D (2014). Specificity of the cyanobacterial orange carotenoid protein: influences of orange carotenoid protein and phycobilisome structures. Plant Physiol, 164:790-804. PubMed | DOI

North HM, Berger A, Saez-Aguayo S, Ralet MC (2014). Understanding polysaccharide production and properties using seed coat mutants: future perspectives for the exploitation of natural variants. Ann Bot, 114:1251-1263. PubMed | DOI

Saez-Aguayo S, Rondeau-Mouro C, Macquet A, Kronholm I, Ralet MC, Berger A, Sallé C, Poulain D, Granier F, Botran L, Loudet O, De Meaux J, Marion-Poll A, North HM (2014). Local evolution of seed flotation in Arabidopsis. PLoS Genet, 10:e1004221. PubMed | DOI

Ihnatowicz A, Siwinska J, Meharg AA, Carey M, Koornneef M, Reymond M (2014). Conserved histidine of metal transporter AtNRAMP1 is crucial for optimal plant growth under manganese deficiency at chilling temperatures. New Phytol, 202:1173-1183. PubMed | DOI

Schmalenbach I, Zhang L, Reymond M, Jiménez-Gómez JM (2014). The relationship between flowering time and growth responses to drought in the Arabidopsis Landsberg erecta x Antwerp-1 population. Front Plant Sci, 5:609. PubMed | DOI

Avila-Ospina L, Moison M, Yoshimoto K, Masclaux-Daubresse C (2014). Autophagy, plant senescence, and nutrient recycling. J Exp Bot, 65:3799-3811. PubMed | DOI

Masclaux-Daubresse C, Clément G, Anne P, Routaboul JM, Guiboileau A, Soulay F, Shirasu K, Yoshimoto K (2014). Stitching together the Multiple Dimensions of Autophagy Using Metabolomics and Transcriptomics Reveals Impacts on Metabolism, Development, and Plant Responses to the Environment in Arabidopsis. Plant Cell, 26:1857-1877. PubMed | DOI

Merkulova EA, Guiboileau A, Naya L, Masclaux-Daubresse C, Yoshimoto K (2014). Assessment and optimization of autophagy monitoring methods in Arabidopsis roots indicate direct fusion of autophagosomes with vacuoles. Plant Cell Physiol, 55:715-726. PubMed | DOI

Orsel M, Moison M, Clouet V, Thomas J, Leprince F, Canoy AS, Just J, Chalhoub B, Masclaux-Daubresse C (2014). Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescence. J Exp Bot, 65:3927-3947. PubMed | DOI

Pottier M, Masclaux-Daubresse C, Yoshimoto K, Thomine S (2014). Autophagy as a possible mechanism for micronutrient remobilization from leaves to seeds. Front Plant Sci, 5:11. PubMed | DOI

Shibata M, Oikawa K, Yoshimoto K, Goto-Yamada S, Mano S, Yamada K, Kondo M, Hayashi M, Sakamoto W, Ohsumi Y, Nishimura M (2014). Plant autophagy is responsible for peroxisomal transition and plays an important role in the maintenance of peroxisomal quality. Autophagy, 10:936-937. PubMed | DOI

Yoshimoto K, Shibata M, Kondo M, Oikawa K, Sato M, Toyooka K, Shirasu K, Nishimura M, Ohsumi Y (2014). Organ-specific quality control of plant peroxisomes is mediated by autophagy. J Cell Sci, 127:1161-1168. PubMed | DOI

Barriere Y, Chavigneau H, Delaunay S, Courtial A, Bosio M, Lassagne H, Derory J, Lapierre C, Méchin V, Tatout C (2013). Different mutations in the ZmCAD2 gene underlie the maize brown-midrib1 (bm1) phenotype with similar effects on lignin characteristics and have potential interest for bioenergy production. Maydica, 58:6-20. PubMed | DOI

Bouvier D'yvoire M, Bouchabké-Coussa O, Voorend W, Antelme S, Cézard L, Legée F, Le Bris P, Legay S, Whitehead C, Mcqueen-Mason SJ, Gomez LD, Jouanin L, Lapierre C, Sibout R (2013). Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J, 73:496-508. PubMed | DOI

Caderby E, Baumberger S, Hoareau W, Fargues C, Decloux M, Maillard MN (2013). Sugar cane stillage: a potential source of natural antioxidants. J Agric Food Chem, 61:11494-11501. PubMed | DOI

Dalmais M, Antelme S, Ho-Yue-Kuang S, Wang Y, Darracq O, D'yvoire MB, Cézard L, Legée F, Blondet E, Oria N, Troadec C, Brunaud V, Jouanin L, Höfte H, Bendahmane A, Lapierre C, Sibout R (2013). A TILLING Platform for Functional Genomics in Brachypodium distachyon. PLoS One, 8:e65503. PubMed | DOI

Domenek S, Louaifi A, Guinault A, Baumberger S (2013). Potential of Lignins as Antioxidant Additive in Active Biodegradable Packaging Materials. Journal of Polymers and the Environment, 21:692-701. PubMed | DOI

Frerot B, Delle-Vedove R, Beaudoin-Ollivier L, Zagatti P, Ducrot PH, Grison C, Hossaert M, Petit E (2013). Fragrant legs in Paysandisia archon males (Lepidoptera, Castniidae). Chemoecology, 23:137-142. PubMed | DOI

Mouterde LMM, Flourat AL, Cannet MMM, Ducrot PH, Allais F (2013). Chemoenzymatic Total Synthesis of a Naturally Occurring (5-5')/(8'-O-4") Dehydrotrimer of Ferulic Acid. European Journal of Organic Chemistry, 2013:173-179. PubMed | DOI

Pion F, Reano AF, Ducrot PH, Allais F (2013). Chemo-enzymatic preparation of new bio-based bis- and trisphenols: new versatile building blocks for polymer chemistry. RSC Advances, 3:8988. PubMed | DOI

Reynaud C, Tapin-Lingua S, Elegir G, Petit-Conil M, Baumberger S (2013). Enhancement of hydrophobicity of kraft pulp via a laccase-lauryl gallate treatment. Journal of Science & Technology for Forest Products and Processes, 3:33-38. PubMed | DOI

Reynaud C, Tapin-Lingua S, Elegir G, Petit-Conil M, Baumberger S (2013). Hydrophobic properties conferred to Kraft pulp by a laccase-catalysed treatment with lauryl gallate. J Biotechnol, 167:302-308. PubMed | DOI

Schumacher J, Gautier A, Morgant G, Studt L, Ducrot PH, Le Pecheur P, Azeddine S, Fillinger S, Leroux P, Tudzynski B, Viaud M (2013). A functional bikaverin biosynthesis gene cluster in rare strains of Botrytis cinerea is positively controlled by VELVET. PLoS One, 8:e53729. PubMed | DOI

Sipponen MH, Lapierre C, Méchin V, Baumberger S (2013). Isolation of structurally distinct lignin-carbohydrate fractions from maize stem by sequential alkaline extractions and endoglucanase treatment. Bioresour Technol, 133:522-528. PubMed | DOI

Zhang Y, Legay S, Barriere Y, Méchin V, Legland D (2013). Color quantification of stained maize stem section describes lignin spatial distribution within the whole stem. J Agric Food Chem, 61:3186-3192. PubMed | DOI

Chen VX, Boyer FD, Rameau C, Pillot JP, Vors JP, Beau JM (2013). New synthesis of A-ring aromatic strigolactone analogues and their evaluation as plant hormones in pea (Pisum sativum). Chemistry, 19:4849-4857. PubMed | DOI

De Saint Germain A, Bonhomme S, Boyer FD, Rameau C (2013). Novel insights into strigolactone distribution and signalling. Curr Opin Plant Biol, 16:583-589. PubMed | DOI